PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g09330.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ARR-B
Protein Properties Length: 143aa    MW: 16003 Da    PI: 5.1771
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g09330.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.93.9e-121131412553
         G2-like  25 ekAtPktilelmkvkgLtlehvkSHLQkY 53 
                      +A+Pk+il+lm+v+ Lt+e+v+SHLQ +
  Vang05g09330.3 113 AEAVPKKILDLMNVEKLTRENVASHLQAF 141
                     57*************************87 PP

2Response_reg64.84e-2289621109
                     TTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
    Response_reg  21 egyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                     +g+  v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g+ +++ + ++ Ga d+l Kp+ +eel +
  Vang05g09330.3   8 DGV-AVTTTNQAITALALLREHKdkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKN 96 
                     677.8999999********999889*******************87754.558***********************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004488.6E-15198IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011035.3431102IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.96E-211101No hitNo description
Gene3DG3DSA:3.40.50.23001.4E-294101No hitNo description
SuperFamilySSF521723.98E-274101IPR011006CheY-like superfamily
PfamPF000725.5E-19696IPR001789Signal transduction response regulator, receiver domain
TIGRFAMsTIGR015577.5E-12113142IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.9E-10113141IPR009057Homeodomain-like
SuperFamilySSF466894.48E-5113142IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MIFILVMDGV AVTTTNQAIT ALALLREHKD KFDLVISDVH MPDMDGFKLL ELVGLEMDLP  60
VIMLSANGDT KLVMKGISHG ACDYLLKPVR MEELKNIWQH YEFGLHDIVV LLAEAVPKKI  120
LDLMNVEKLT RENVASHLQA FF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-99AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945363.12e-63PREDICTED: two-component response regulator ARR10-like
SwissprotB8B3I44e-51ORR22_ORYSI; Two-component response regulator ORR22
SwissprotQ5SML54e-51ORR22_ORYSJ; Two-component response regulator ORR22
TrEMBLA0A103XN081e-61A0A103XN08_CYNCS; CheY-like superfamily
STRINGGLYMA04G06650.14e-54(Glycine max)
STRINGGLYMA06G06730.14e-54(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.16e-50response regulator 10